PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv8_196840_quuj.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 396aa    MW: 43801.2 Da    PI: 6.9399
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv8_196840_quuj.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000532753131255
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  Bv8_196840_quuj.t1 275 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 313
                         6678889999999999998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.566263312IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.5E-10273323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.26E-6273317No hitNo description
Gene3DG3DSA:4.10.280.103.4E-7277319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MNRGHHVLQN SPVQQMMVAG NPSWWPNINN LMRPPIISSS HHHQQPLLSS PSSSSTTNFL  60
APPPNNNNND INNNVYQAHY NMNNMPTQAS SSSWLDDHHA NQHHQEQHQQ VLPESWSQLL  120
LGGVFLGDEA KKMETNWEEQ VVLQQQQHHP HLIDVKQESS VNSYTNNVYS TTTTQDQEFH  180
LAAAAATTNN WSHHHPHQLN IPVSSPQSCV TSYSSSNNLL DFSSSISSEN LHSRQPPPPP  240
PDRSSECNST NTGGAAKKAK VQASSTQSST TFKVRKEKLG DRITALHQLV SPFGKTDTAS  300
VLLEAIGYIR FLQSQIEALS LPYLNTGTGN KRQPHTILND NCLKRKGGPD DQDSYDQEPK  360
DLRSRGLCLV PVSCTLHVGS DNGADYWAPA LGGGFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010688253.10.0PREDICTED: transcription factor bHLH68
TrEMBLA0A0J8BPG00.0A0A0J8BPG0_BETVU; Uncharacterized protein
STRINGPOPTR_0018s09060.11e-112(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-61bHLH family protein